BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033B03LP1|AL429681
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig623 1725 0.0
>3x_Contig623
Length = 1951
Score = 1725 bits (870), Expect = 0.0
Identities = 909/922 (98%)
Strand = Plus / Plus
Query: 1 cctttgatttcctggctcccgtgttcactatcatcttcgatgacatggacgatacaactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctttgatttcctggctcccgtgttcactatcatcttcgatgacatggacgatacaactg 623
Query: 61 aagaagtgaacctttcccacggagtacagatccccatcgagttctacccccaactgtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aagaagtgaacctttcccacggagtacagatccccatcgagttctacccccaactgtata 683
Query: 121 ccaagaatgctttggaaaaagtggtcgtccctgtcctcgaggagactgatgccttaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccaagaatgctttggaaaaagtggtcgtccctgtcctcgaggagactgatgccttaagga 743
Query: 181 atactaataagttgaaagtggaccaaatgtcatccttgcaatcgtttcaggggaagcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atactaataagttgaaagtggaccaaatgtcatccttgcaatcgtttcaggggaagcaga 803
Query: 241 tcagctctttcttgaacagttccatcaattacttggaagaaattccattaggagacgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tcagctctttcttgaacagttccatcaattacttggaagaaattccattaggagacgaag 863
Query: 301 ataaatcaaaagagttggttgacactttagaaaaaatcaagtaccagctatcgaacaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ataaatcaaaagagttggttgacactttagaaaaaatcaagtaccagctatcgaacaaga 923
Query: 361 aacgtgaaatgatggccgattatacagaaactcaaagacaaatcgatttgttatcctttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 aacgtgaaatgatggccgattatacagaaactcaaagacaaatcgatttgttatcctttg 983
Query: 421 aaggaccatctgaaaagataatcgatctggcaaaacaggttggtatcattgatgagccgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 aaggaccatctgaaaagataatcgatctggcaaaacaggttggtatcattgatgagccgt 1043
Query: 481 acctactccggctagtggtattttcgccaaacgactacataattgcacgtggaatcagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 acctactccggctagtggtattttcgccaaacgactacataattgcacgtggaatcagtg 1103
Query: 541 ctgacgatggtaataccggcatggaaactggcaacaacaatctgcagtatatcaggaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 ctgacgatggtaataccggcatggaaactggcaacaacaatctgcagtatatcaggaata 1163
Query: 601 tcattgagtttggatcaagcagcctcactcaagaggaactcacagcgcaggaaactcaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 tcattgagtttggatcaagcagcctcactcaagaggaactcacagcgcaggaaactcaag 1223
Query: 661 atataacaaaatcacacacaagacatgcatccgagactccaatccttttcgtttacatta 720
||||||||||||||||||||||| | || |||||||||||| |||||||||||||||||
Sbjct: 1224 atataacaaaatcacacacaagaaaaacaaccgagactccaaaccttttcgtttacatta 1283
Query: 721 aaaaagaccatattgacgcaccgcaagatattctggcttccatttccgaaaatgaaaccc 780
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 aaaaaaaccatattgacgcaccgcaagatattctggcttccatttccgaaaatgaaaccc 1343
Query: 781 taacaaatttcctcaaagaagagcacactacgtacgttaattataaacagtcaccgtaaa 840
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 taacaaatttccaccaggaagagcacactacgtacgttaattataaacagtcaccgtaaa 1403
Query: 841 cgcatgaaatgtaattacctataataatcatacatgttttactgagagaataaaatagag 900
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 cgcatgaaatgcgtatacctataataatcatacatgttttactgagagaataaaatagag 1463
Query: 901 ttttctccttctagatgacctg 922
||||||||||||||||||||||
Sbjct: 1464 ttttctccttctagatgacctg 1485
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6753
Number of Sequences: 1807
Number of extensions: 6753
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)